Themes of Doctoral Theses | Faculty of Biomedical Engineering

Department of Biomedical Technology#kbt

Name	Tutor	Tutor-specialist
Exploring the limits of spectral X-ray imaging with Timepix3	Ing. Jan Žemlička, Ph.D., Ústav technické a experimentální fyziky	Dr. Michael Campbell
Optimisation of artificial lung ventilation during high frequency oscillatory ventilation	prof. Ing. Karel Roubík, Ph.D., katedra biomedicínské techniky	MUDr. Petr Waldauf, KAR FN KV
Optimisation of atificial lung ventilation with heliox	prof. Ing. Karel Roubík, Ph.D., katedra biomedicínské techniky	MUDr. Martin Müller, KAR UVN Praha
Optimization of mechanical ventilation using electrical impedance tomography	prof. Ing. Karel Roubík, Ph.D., katedra biomedicínské techniky	MUDr. Tomáš Tyll, KAR UVN Praha
Medical diagnostics based on EM field	prof. Dr.-Ing. Jan Vrba, M.Sc., katedra biomedicínské techniky	doc. Ing. David Vrba, Ph.D., katedra biomedicínské techniky
Applicators foe EM Thermotherapy	prof. Ing. Jan Vrba, CSc., katedra biomedicínské techniky	doc. Ing. David Vrba, Ph.D, katedra biomedicínské techniky
Expert system for acquisition of medical devices	prof. Ing. Peter Kneppo, DrSc., katedra biomedicínské techniky
Health technology assessment (HTA) of medical devices	prof. Ing. Peter Kneppo, DrSc., katedra biomedicínské techniky
A hierarchical choice modeling approach for selection of large medical equipment	prof. Ing. Peter Kneppo, DrSc., katedra biomedicínské techniky
Lifecycle Management Process Model for Medical Equipment	prof. Ing. Peter Kneppo, DrSc., katedra biomedicínské techniky
Monitoring and optimizing the risk management process of medical devices at EU level	prof. Ing. Peter Kneppo, DrSc., katedra biomedicínské techniky
Modeling and Mapping of Bioelectrical sources	doc. Ing. Milan Tyšler, CSc., katedra biomedicínské techniky	prof. Ing. Peter Kneppo, DrSc., katedra biomedicínské techniky
Artificial neuron-diamond nanoelectrode interfaces	prof. RNDr. Miloš Nesládek, Ph.D., katedra biomedicínské techniky	doc. Ing. Vladimíra Petráková, Ph.D.
Construction of Deep Brain stimulation electrodes from biocompatible diamond material	prof. RNDr. Miloš Nesládek, Ph.D., katedra biomedicínské techniky
Optical and magnetic reading of neural signals using NV and SiV centers in diamond	prof. RNDr. Miloš Nesládek, Ph.D., katedra biomedicínské techniky
Optimization of 3D diamond – neural functional interface	prof. RNDr. Miloš Nesládek, Ph.D., katedra biomedicínské techniky
The single molecular sensors using microfluidic NV sensor	prof. RNDr. Miloš Nesládek, Ph.D., katedra biomedicínské techniky
Magnetic field imaging in biological systems with nanometric resolution	prof. RNDr. Miloš Nesládek, Ph.D., katedra biomedicínské techniky	Mgr. Zdeněk Remeš, Ph.D.
Ultra-sensitive bio-molecular sensors based on color centres in diamond for diagnostics in nano-medicine.	prof. RNDr. Miloš Nesládek, Ph.D., katedra biomedicínské techniky	Mgr. Zdeněk Remeš, Ph.D.
Management of the processes of acquisition of medical equipment	prof. Ing. Peter Kneppo, DrSc., katedra biomedicínské techniky	Ing. Martin Mayer, Ph.D., MHA
Smart structures for applications at biomedical and clinical technics and environmental safety	prof. Dr. Ing. Anton Fojtík, CSc., katedra biomedicínské techniky	Ing. Jan Grym, Ph.D., UFE AV ČR
The biofunctionalization of the nanostructured surfaces in nanomedicine	Mgr. Zdeněk Remeš, Ph.D.	Ing. Alexander Kromka, Ph.D., FZÚ AVČR, v.v.i.,Praha Ing. Júlia Mičová, Ph.D., CHU SAV, Bratislava
In vitro simulation of vascular wall for stem cell differentiation	doc. MUDr. Lucie Bačáková, CSc., Fyziologický ústav AV ČR	Ing. Roman Matějka, katedra biomedicínské techniky
The role of monitoring regional tissue oxygenation in the diagnosis of immature newborns	doc. Ing. Petr Kudrna, Ph.D., katedra biomedicínské techniky
Optimizing of the management of phototherapy for the treatment of neonatal hyperbilirubinemia	doc. Ing. Petr Kudrna, Ph.D., katedra biomedicínské techniky	prof. MUDr. Richard Plavka, CSc., VFN v Praze
Measurement and evaluation of Work of Breathing under extreme hypercapnica induced by ventilation insufficiency	Ing. Jakub Ráfl, Ph.D., katedra biomedicínské techniky	prof. Ing. Karel Roubík, Ph.D., katedra biomedicínské techniky
Optimization of automatic control of oxygenation in premature infants	Ing. Jakub Ráfl, Ph.D., katedra biomedicínské techniky	Thomas E. Bachman, M.Sc., katedra biomedicínské techniky
Dependence of physiological and ventilatory parameters of the ventilated subject upon the set parameters of mechanical ventilation	doc. Ing. Martin Rožánek, Ph.D., katedra biomedicínské techniky
Analysis of biological signals in evaluation of course of diagnostic and therapeutic process	doc. Ing. Martin Rožánek, Ph.D., katedra biomedicínské techniky
Personalized treatment planning for transcranial magnetic stimulation	doc. Ing. David Vrba, Ph.D., katedra biomedicínské techniky	prof. Dr.-Ing. Jan Vrba, M.Sc., katedra biomedicínské techniky
Metamaterials in Medicine	doc. Ing. David Vrba, Ph.D., katedra biomedicínské techniky	prof. Ing. Jan Vrba, CSc., Fakulta elektrotechnická ČVUT v Praze
Use of biological and synthetic materials in regenerative medicine	doc. MUDr. Lucie Bačáková, CSc., Fyziologický ústav AV ČR	MUDr. Serhiy Forostyak, Ph.D.
Application of modern technologies (nanofibers and 3D print), biomaterials and cell-based products for tissue replacement	doc. Mudr. Lucie Bačáková, CSc., Fyziologický ústav AV ČR	MUDr. Serhiy Forostyak, Ph.D.
Optimization of dynamic culture system for preparation of endothelized tissue grafts based on decellularized tissues with stem cells	doc. MUDr. Lucie Bačáková, CSc., Fyziologický ústav AV ČR	Ing. Roman Matějka, Ph.D.
Optimization of oxygen therapy of extremely immature newborns	doc. Ing. Petr Kudrna, Ph.D., katedra biomedicínské techniky	prof. MUDr. Richard Plavka, CSc., VFN v Praze
The role of capnometry in immatutre newborns	doc. Ing. Petr Kudrna, Ph.D., katedra biomedicínské techniky
Optimization of sympthoms display of electromechanical heart dyssynchrony	doc. Ing. Jiří Hozman, Ph.D., katedra biomedicínské techniky	doc. MUDr. Lucie Reidlbauchová, Ph.D.
Methodology of providing optimal variant of technical support of general anesthesia	doc. MUDr. Jan Bruthans, Ph.D., katedra biomedicínské techniky
Optimization of 3D bioprinting on decellularized scaffolds for preparation of implantable cardiovascular replacements	doc. Ing. Roman Matějka, Ph.D.	Ing. Jana Štěpanovská, Ph.D.
Concurrent EEG/fMRI measurement with datadriven prediction and aberrations in modulation network excitability	Ing. Marek Piorecký, Ph.D.	Ing. Václava Piorecká, Ph.D.
Optimization of whole body simulators	prof. Ing. Karel Roubík, Ph.D.	MUDr. Tomáš Tyll, Ph.D.
Increasing the therapeutic and diagnostic capabilities of devices for artificial lung ventilation	prof. Ing. Karel Roubík, Ph.D.	MUDr. Tomáš Tyll, Ph.D.
Approaches to technology assessment in the tretment of multiple schlerosis from a societal perspective	doc. Ing. Martin Rožánek, Ph.D.	Ing. Ondřej Gajdoš, Ph.D.
Early stage HTA in the development of an implantable orthopaedic medical device	doc. Ing. Martin Rožánek, Ph.D.	Ing. Ondřej Gajdoš, Ph.D.
Optimization of MicroCT biological tissue imaging	doc. Ing. Jiří Hozman, Ph.D.	MUDr. Jana Mrzílková, Ph.D.
Mathematical modeling of parameters for managed entry agreements for health technologies	Dr. Aleš Tichopád
Quality indicators fot health services covered by health insurance	Dr. Aleš Tichopád
Options for the Detection, Acquisition, and Localization of the Source of a Magnetic Resonance Signa	doc. Ing. Jiří Hozman, Ph.D.	Ing. Tomáš Dřížďal, Ph.D.
Modelling the patient journey through the healthcare system	Dr. Aleš Tichopád
Optimization of microwave regional hyperthermia treatment	Ing. Tomáš Dřížďal, Ph.D.
Integration of physiological parameter information in neuropsychiatric research	Ing. Václava Piorecká, Ph.D.
Analysis of 12-lead ECG for the assessment of electrical heterogeneity in heart ventricles	Ing. Ksenia Sedova, Ph.D.	Peter van Dam, Ph.D.
Analysis of ventricular repolarization for prediction of arrhythmias	Ing. Ksenia Sedova, Ph.D.
Artificial intelligence methods in use for dynamic behaviour model creation of selected medical thermometers	doc. RNDr. Jiří Tesař, PhD.	Dr. Ing. Radek Strnad, Ph.D.
Advance metrology methods in the evaluation of medical devices with measuring function according to the MDR	doc. RNDr. Jiří Tesař, PhD.	prof. RNDr. MUDr. Jiří Beneš, CSc.

Department of Biomedical Informatics#kbi

Name	Tutor	Tutor-specialist
Modeling and analysis of human walking dynamics for the purpose of identifying and quantifying failures disrupting locomotion of patients	Ing. Jan Kauler, Ph.D., Katedra biomedicínské informatiky
Correlation of neuroimaging and neurophysiologic parameters in presymptomatic and manifested Parkinson’s disease	doc. Mgr. Radim Krupička, Ph.D., Katedra biomedicínské informatiky
Quantitative neuroimaging of substantia nigra for neurdegenerarion diagnosis	doc. Mgr. Radim Krupička, Ph.D., Katedra biomedicínské informatiky	MUDr. Petr Dušek, Ph.D.
Analysis of movement disorders for the studyof extrapyramidal diseases mechanisms	doc. Mgr. Radim Krupička, Ph.D., Katedra biomedicínské informatiky	prof. MUDr. Evžen Růžička, DrSc.
Biometric identification and authentication through keyboard and pointing devices in healthcare applications.	RNDr. Dagmar Brechlerová, Ph.D., Katedra biomedicínské informatiky	Ing. Anna Schlenker
Use of functional magnetic resonance for muscle group activity analysis in Cervical dystonia	doc. Mgr. Radim Krupička, Ph.D., katedra biomedicínské informatiky	prof. MUDr. Robert Jech, Ph.D.
IT security solutions in healthcare facilities in accordance with legislative requirements	RNDr. Dagmar Brechlerová, Ph.D.
Optimization and scalability of workflows for biomedical data processing	doc. Mgr. Radim Krupička, Ph.D.
Instrumental assessment of the effect of intervention on gait in patients with neurological disorders	Mgr. Slávka Neťuková, Ph.D.	prof. MUDr. Evžen Růžička, DrSc.
Methods for detecting genetic aberrations in patients with chronic myeloid and acute lymphoblastic leukemias	Ing. Ondřej Klempíř, Ph.D.	RNDr. Jitka Koblihová, Ph.D.

Department of Natural Sciences#kpo

Name	Tutor	Tutor-specialist
Selective anchoring of biomolecules with strong potential for diagnostic and therapeutic application in medicine	Dr. habil. Stefan Vajda, Argonne National Laboratory, USA	doc. RNDr. Vlastimil Fidler, CSc., Katedra přírodovědných oborů FBMI ČVUT
Endoscopic evaluation of ciliary beating in respiratory epithelium by using laser reflectometry	prof. MUDr. Pavel Kučera, Ph.D., Katedra přírodovědných oborů FBMI ČVUT	doc. Ing. Marie Pospíšilová, CSc., Katedra přírodovědných oborů FBMI ČVUT
Selective phototherapy of cancer cells during cystoscopy with the use of optical fiber bundles	prof. MUDr. Pavel Kučera, Ph.D., Katedra přírodovědných oborů FBMI ČVUT	Ing. Marie Pospíšilová, CSc., Katedra přírodovědných oborů FBMI ČVUT N. Lange PhD., prof. P. Jichlinski
Mass spectrometry for breath analysis in clinical diagnostics	prof. Dr. Patrik Španěl, Katedra přírodovědných oborů FBMI ČVUT	Mgr. Kristýna Sovová
Computational and experimental analysis of spinal and spinal elements characteristics	Ing. Martin Otáhal, Ph.D., Katedra přírodovědných oborů	Ing. Petr Kuboví, FTVS UK Ing. Josef Šepitka, Ph.D., FS ČVUT
Interaction between actin filaments and microtubules mediated by molecular motors	RNDr. Zdeněk Lánský, Ph.D.	Ing. Dalibor Pánek, Ph.D.
Advanced methods of long-term multi-channel signal processing in neurosciences	do. Ing. Lenka Lhotská, CSc.	MUDr. Martin Brunovský, Ph.D.
Ketones and lactate as an alternative source of energyfor hypoglycemic newborns	Ing. Jan Hlúbik, Ph.D., ČVUT CIIRC	prof. MUDr. Kateřina Štechová, Ph.D., 2. lékařská fakulta UK
Changes in bodycomposition and electrical quantities measured by bioimpedance in pregnant women treated for pregestational diabetes	Ing. Jan Hlúbik, Ph.D., ČVUT CIIRC	prof. MUDr. Kateřina Štechová, Ph.D., 2. lékařská fakulta UK
Application of virtual reality to rehabilitation	doc. Ing. Lenka Lhotská, CSc., katedra přírodovědných oborů	MUDr. Michaela Tomanová, Ph.D.
Application of virtual reality to keeping the elderly people active	doc. Ing. Lenka Lhotská, CSc., katedra přírodovědných oborů	doc. MUDr. Iva Holmerová, Ph.D.
Improving the properties of implants using doped biomaterials and hybrid deposition	Ing. Petr Písařík, Ph.D.	Ing. Jan Mikšovský, Ph.D. Ing. Jan Remsa, Ph.D.
Bioactive nanolayers for coating implants	Ing. Tomáš Kocourek, Ph.D.
Constructuon, optimization and testing of specific nanofiber-based nanobiosensors for ultrasesnsitive detection of viruses and bacterias	doc. Ing. Marie Pospíšilová, CSc., katedra přírodovědných oborů	prof. RNDr. Evžen Amler, CSc.
Combination of porous nano-diamond based electrochemical and electro- acoustic wave sensors	Dr. Vincent Mortet, Ph.D.
Experimental analysis of the physical response of cells to external stimuli	Ing. Martin Otáhal, Ph.D.	prof. Matěj Daniel, Ph.D.
Fluorescence of photosenitizers for intracellular oxygen sensing	doc. RNDr. Vlastimil Fidler, CSc.	Ing. Petr Brůže, Ph.D.
Scintillation detectors in ultra-high dose rate radiotherapy	doc. RNDr. Vlastimil Fidler, CSc.	Ing. Petr Brůže, Ph.D.
Description of Spatial Perception, Models and Technology	prof. MUDr. RNDr. Petr Maršálek, Ph.D.
Time-resolved luminescence spectroscopy of fast scintillators	doc. RNDr. Vlastimil Fidler, CSc.	Ing. Tomáš Parkman, Ph.D.
Soft X-ray microscopy of biological cells	prof. Ing. Miroslava Vrbová, CSc.	Ing. Tomáš Parkman, Ph.D.
Development of new scintillators for medical imaging	doc. RNDr. Vlastimil Fidler, CSc.	Ing. Petr Brůža, Ph.D. Ing. Tomáš Parkman, Ph.D.
Development and testing of nanochips based on functionalized nanofibers for early-stage serious diseases detection	RNDr. Taťána Jarošíková, CSc.	prof. RNDr. Evžen Amler, CSc.
Fiber optic sensor for measuring the frequency of respiratory epithelium cilia	doc. Ing. Marie Pospíšilová
Study of emise spectra of native biofluorophores of cells with the aim of recognizing healthy and tumor cells of the realized fiber sensor	doc. Ing. Marie Pospíšilová
Sensitive impedance detection of the low-concentrated serious disease specific markers on functionalized nanofiber membranes	RNDr. Taťána Jarošíková, CSc.	prof. RNDr. Evžen Amler, CSc.

Department of Health Care Disciplines and Population Protection#kzooo

Name	Tutor	Tutor-specialist
Construction of biosensors for diagnostics of galectin-dependent cancers	doc. RNDr. Pavla Bojarová, Ph.D.
Efficacy of extracorporeal shockwave therapy in early stage of cubital tunnel syndrome	prof. MUDr. Ivan Dylevský, DrSc.	MUDr. Tomáš Nedělka, Ph.D.
Evaluation of muscle spasticity based on analysis of dynamic parameters of movement	doc. Ing. Patrik Kutílek, M.Sc., Ph.D.	prof. MUDr. Robert Jech, Ph.D.
Measurement methods for the identification and description of kinematics of muscle groups	doc. Ing. Patrik Kutílek, M.Sc., Ph.D.	as. MUDr. Rudolf Černý, CSc
Evaluation methods of body movement data in distance medicin	doc. Ing. Patrik Kutílek, M.Sc., Ph.D.
Methods of measurement and evaluation of treatment of articular pathologies using perspective kinematic motion parameters	doc. Ing. Patrik Kutílek, M.Sc., Ph.D.	doc. MUDr. Vojtěch Havlas, Ph.D.
Methods and system for assessing the physical and psychological state of the personnel	doc. Ing. Patrik Kutílek, M.Sc., Ph.D.	mjr. Ing. Václav Křivánek, Ph.D., Mgr. et Mgr. Iveta Fajnerová, Ph.D.
Methods for evaluating data measured by non-contact measurement of movement and determination of patient's health status on bed	doc. Ing. Patrik Kutílek, M.Sc., Ph.D.	doc. Ing. Lenka Lhotská, CSc.
Application of smart hip endoprosthesis to monitor the internal environment of the body and the state of endoprosthesis	doc. Ing. Patrik Kutílek, M.Sc., Ph.D.	Ing. Zdeněk Čejka, ProSpon spol.s r.o.
Methods of evaluating polysomnographic examinations during sleep in prediction of Alzheimer's disease	doc. Ing. Patrik Kutílek, M.Sc., Ph.D.	PhDr. Jana Kopřivová, Ph.D., NUDZ
Methods of processing and archiving kinematic and physiological data in remote monitoring of physical and mental condition	Ing. et Ing. Hejda, Ph.D.	Mgr. et Mgr. Iveta Fajnerová, Ph.D. (NUDZ) doc. Mgr. Zdeněk Svoboda Ph.D. (FTK UP) doc. Ing. Patrik Kutílek, Ph.D.
Methods and systems for assessing the physical and mental condition of personnel during analog and space missions	Ing. et Ing. Hejda, Ph.D.	doc. Ing. Patrik Kutílek, Ph.D. pplk. MUDr. Markéta Hejsková
Construction of experimental biosensors for diagnostics of galectinsin complexmatrices such as blood serum	doc. RNDr. Pavla Bojarová, Ph.D.
Preparation, characterization and optimization of glyco-nanomaterials withtherapeutic potential	doc. RNDr. Pavla Bojarová, Ph.D.
Feedback methods and systems for maintaining the physical fitness of personnel in an ICE environment	Ing. et Ing. Jan Hejda, Ph.D.	doc. Ing. Patrik Kutílek, Ph.D.
Haemodynamic model for radiation induced lymphopenia description	prof. MUDr. Jozef Rosina, Ph.D., MBA

Department of Information and Communication Technologies in Medicine#kit

Name	Tutor	Tutor-specialist
Design of a model for a personalized prediction of resting energy expenditure	doc. Ing. Pavel Smrčka, Ph.D.
Optimization of Patient Data Display for Diabetology Outpatient Office	Ing. Jan Mužík, Ph.D.
Optimization of the ICT Tools to Support Patients with Chronic Diseases	Ing. Jan Mužík, Ph.D.
Artificial Intelligence Methods for Coaching Patients with Chronic Diseases in Natural Language	Ing. Jan Mužík, Ph.D.
Detectionof Behavioral Changes and Estimation of Biological Age Based on Data Analysis from Social Networks	doc. Ing. Karel Hána, Ph.D.
Utilization of IoT (Internet of Things) Resources in Intelligent Flatsto Ensure Effective Health Care for their Residents	doc. Ing. Karel Hána, Ph.D.
Innovation of Personal health Devices Focused on Increase of Patient Adherence	Ing. Jan Mužík, Ph.D.